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Table 2 Average plate count measurements (±SEM), expressed in log CFU mL 1 , for the different microbial groups, SHIME compartments and periods

From: Lactobacillus acidophilus CRL 1014 improved “gut health” in the SHIME®reactor

 

Basal

Treatment

Washout

 

1stweek

2ndweek

1stweek

2ndweek

3thweek

4thweek

1stweek

2ndweek

Ascending colon

Enterococcus spp

5.20a ± 0.01

5.40a ± 0.02

6.30b ± 0.10

7.25c ± 0.04

7.20c ± 0.06

8.05d ± 0.21

7.00c ± 0.02

7.00c ±0.01

enterobacteria

7.35d ± 0.41

6.00c ± 0.30

6.20c ± 0.32

6.40c ± 0.01

6.72c ± 0.22

6.80c ± 0.32

5.68b ± 0.01

4.20a ± 0.05

Lactobacillus spp

5.17a ± 0.30

5.23a ± 0.22

7.78b ± 0.03

7.77b ± 0.01

8.28c ± 0.05

7.88bc ± 0.01

7.20b ± 0.04

5.40a ± 0.04

Bifidobacterium spp

5.80a ± 0.22

6.90b ± 0.55

7.77c ± 0.01

7.86c ± 0.05

7.88c ± 0.06

7.97c ± 0.06

7.68c ± 0.03

7.61c ± 0.04

Clostridium spp

7.68a ± 0.02

8.32b ± 0.02

8.69b ± 0.01

9.39bc ± 0.01

12.39d ± 0.01

12.30d ± 0.02

12.40d ± 0.01

12.39d ± 0.01

Total aerobes

7.14a ± 0.41

7.84a ± 0.05

7.72a ± 0.01

7.42a ± 0.02

7.55a ± 0.04

7.32a ± 0.01

7.30a ± 0.01

7.42a ± 0.05

Facultative anaerobes

7.66a ± 0.03

8.20a ± 0.02

7.80a ± 0.02

7.60a ± 0.04

7.40a ± 0.01

7.30a ± 0.03

7.46a ± 0.02

7.50a ± 0.01

Transverse colon

Enterococcus spp

4.14a ± 0.22

4.44a ± 0.02

7.19b ± 0.01

6.84b ± 0.01

7.45b ± 0.03

7.50b ± 0.05

7.00b ± 0.04

7.00b ± 0.01

enterobacteria

6.23b ± 0.46

5.15a ± 0.15

5.00a ± 0.01

6.30b ± 0.01

6.00b ± 0.01

6.00b ± 0.01

6.84b ± 0.01

6.86b ± 0.02

Lactobacillus spp

5.20a ± 0.02

5.19a ± 0.02

7.72b ± 0.02

7.35b ± 0.05

7.24b ± 0.01

7.17b ± 0.05

8.33b ± 0.05

8.40b ± 0.01

Bifidobacterium spp

5.80a ± 0.07

5.00a ± 0.01

7.18b ± 0.14

7.86b ± 0.05

7.43b ± 0.01

7.31b ± 0.14

7.79b ± 0.05

7.80b ± 0.02

Clostridium spp

6.61a ± 0.01

6.62a ± 0.01

7.27a ± 0.01

8.39b ± 0.01

8.26b ± 0.03

8.53b ± 0.23

10.39c ± 0.01

10.40c ± 0.01

Total aerobes

7.00a ± 0.02

7.20a ± 0.20

7.74a ± 0.02

7.32a ± 0.11

7.82a ± 0.02

7.86a ± 0.03

8.69b ± 0.22

8.64b ± 0.10

Facultative anaerobes

6.32a ± 0.07

6.30a ± 0.01

6.00a ± 0.41

6.20a ± 0.13

6.10a ± 0.22

6.30a ± 0.01

7.80ab ± 0.01

8.10b ± 0.11

Descending colon

Enterococcus spp

4.30a ± 0.02

4.32a ± 0.01

7.08b ± 0.01

6.66b ± 0.02

6.75b ± 0.05

6.76b ± 0.04

7.08b ± 0.02

7.06b ± 0.01

enterobacteria.

7.46b ± 0.06

6.00a ± 0.01

6.15a ± 0.15

6.30a ± 0.01

6.00a ± 0.01

6.00a ± 0.01

5.67ab ± 0.01

5.70ab ± 0.01

Lactobacillus spp

5.36a ± 0.01

5.38a ± 0.02

7.46b ± 0.02

7.23b ± 0.06

7.13b ± 0.09

6.53b ± 0.53

7.20b ± 0.01

7.27b ± 0.08

Bifidobacterium spp

6.79b ± 0.04

5.72a ± 0.12

7.15c ± 0.01

7.53c ± 0.01

6.84bc ± 0.15

7.37c ± 0.03

7.55c ± 0.01

7.47c ± 0.01

Clostridium spp

7.72a ± 0.01

7.74a ± 0.06

8.48b ± 0.01

9.39c ± 0.01

10.50d ± 0.15

10.50d ± 0.02

10.34d ±0.02

10.38d ± 0.44

Total aerobes

7.24a ± 0.07

7.53a ± 0.01

7.44a ± 0.01

7.47a ± 0.42

7.58a ± 0.09

7.86a ± 0.05

8.00a ± 0.01

8.20a ± 0.45

Facultative anaerobes

7.39b ± 0.11

6.30a ± 0.01

6.59a ± 0.01

6.39a ± 0.02

6.40a ± 0.01

6.00a ± 0.03

7.69b ± 0.01

7.63b ± 0.05

  1. Different letters indicate significantly different results (p < 0.01) in same microbial group and same compartment (ascending, transverse, and descending colon), during basal, treatment and washout period.