Skip to main content

Table 3 Metabolic function prediction of the microbiota by PICRUSt2 of the RCC and control groups

From: The gut microbiota composition in patients with right- and left-sided colorectal cancer and after curative colectomy, as analyzed by 16S rRNA gene amplicon sequencing

Variable

P-value

Upregulation (RCC > C)

Maltose 6′-phosphate phosphatase) a)

0.0043

Sulfoquinovose isomerasea)

0.0094

D-alanine-poly(phosphoribitol) ligasea)

0.0125

Dodecanoyl-[acyl-carrier-protein] hydrolase

0.0127

Phosphoenolpyruvate carboxykinase (GTP)a)

0.0135

Mevalonate kinaseb)

0.0138

DNA-3-methyladenine glycosylase II

0.0141

(2Z,6E)-farnesyl diphosphate synthaseb)

0.0146

Diphosphomevalonate decarboxylaseb)

0.0147

Phosphomevalonate kinaseb)

0.0150

Downregulation (C > RCC)

2-Aminoethylphosphonate-pyruvate transaminase

0.0011

Ferredoxin hydrogenase

0.0026

Adenosylmethionine-8-amino-7-oxononanoate transaminase

0.0031

Dethiobiotin synthase

0.0036

UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

0.0040

Kdo(2)-lipid IV(A) lauroyltransferase

0.0041

UDP-3-O-acyl-N-acetylglucosamine deacetylase

0.0042

Fumarate reductase (quinol)c)

0.0042

3-Deoxy-8-phosphooctulonate synthase

0.0043

Succinate dehydrogenase (quinone)c)

0.0043

  1. Using enzyme classification (EC) numbers, we tabulated the top 10 enzyme-encoding genes with highly significant differences between the RCC and control groups. Each metabolism-related enzyme was classified according to function within the range that could be discriminated as follows. a) sugar metabolism-related; b) cholesterol-related; c) short-chain fatty acid-related